REPORT
Mycobacterium tuberculosis complex Rapid Molecular Detection/Identification (PCR)
San Francisco Public Health LaboratoryTest Order Name - Identification of Mycobacterium tuberculosis Complex by Real-Time PCR
Synonym(s) - Mycobacterium tuberculosis complex Detection and Rifampin Resistance Detection by PCR
Methodology - Real-time PCR (Cepheid GeneXpert)
Acceptable Specimen Type(s) for Testing - Sputum (expectorated or induced) sediment
Transport / Collection Medium - Sterile collection vial
Storage and Preservation of Specimen - Keep sediments refrigerated 2 to 8°C for a maximum of 10 days. Storage beyond 10 days must be at -35°C or below.
Minimum Volume Required - 0.5 milliliters sputum sediment
Additional Collection Instructions - Only concentrated sputum sediments accepted
Additional Required Information - Collection date required
Send Out? - No
Turnaround Time - 24 hours
Testing Restrictions - None
Limitations / Notes / Disclaimers - Detection of Mycobacterium tuberculosis complex (M.tb. complex) by this assay is dependent upon the number of organisms present in the sample. Hence, reliable results require proper specimen collection, handling, and storage. Careful compliance to this protocol is essential for avoiding erroneous results. A positive test result does not necessarily denote the presence of viable organisms but is presumptive for the presence of M.tb. complex. Mutations or polymorphisms in either the primer or probe binding sites of the target organisms may negatively affect the detection of novel or unknown strains of M.tb. complex. Moreover, some specimens with very few viable organisms will be negative by this assay but may be positive by culture.